Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm45850-201ENSMUST00000212536 338 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm20786-201ENSMUST00000212649 436 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm18120-201ENSMUST00000220079 511 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 AC154487.1-201ENSMUST00000224649 226 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 AC165287.1-201ENSMUST00000224985 178 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Cthrc1-204ENSMUST00000226433 596 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm24292-201ENSMUST00000082888 107 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm7562-201ENSMUST00000210502 2537 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm37618-201ENSMUST00000192891 3075 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.85□□□□□ -1.47
Hoxd3P09027 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hoxd3P09027 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hoxd3P09027 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm43775-201ENSMUST00000201019 3395 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm44669-201ENSMUST00000207774 1969 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 AC165260.6-202ENSMUST00000224959 1958 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm37783-201ENSMUST00000192025 1856 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm14558-201ENSMUST00000117458 381 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm13890-201ENSMUST00000117578 390 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm16511-201ENSMUST00000120019 564 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm15168-201ENSMUST00000121057 316 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC5.84□□□□□ -1.47
Hoxd3P09027 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm25827-201ENSMUST00000157089 107 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm22915-201ENSMUST00000157615 136 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm24782-201ENSMUST00000157641 132 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm22839-201ENSMUST00000158436 304 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm3030-201ENSMUST00000163410 516 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm21430-201ENSMUST00000182998 998 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm29008-201ENSMUST00000189387 298 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm29143-201ENSMUST00000189462 201 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm28188-201ENSMUST00000190483 236 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm18428-201ENSMUST00000194986 791 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Hoxd3P09027 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm45319-201ENSMUST00000210220 318 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm32899-201ENSMUST00000219694 207 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gm18503-201ENSMUST00000220340 728 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 CT030175.1-201ENSMUST00000220822 408 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 CT030260.1-201ENSMUST00000223243 442 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 AC069562.1-201ENSMUST00000224206 434 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Hoxd3P09027 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.84□□□□□ -1.47
Hoxd3P09027 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Hoxd3P09027 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms