Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm17223-201ENSMUST00000171413 481 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Mir7685-201ENSMUST00000183555 62 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm28580-201ENSMUST00000186767 88 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm4751-201ENSMUST00000200620 1105 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm42799-201ENSMUST00000201331 328 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm7252-201ENSMUST00000223284 456 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 AC133176.1-201ENSMUST00000226668 219 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 mt-Td-201ENSMUST00000082404 70 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm6166-201ENSMUST00000098689 409 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm43789-201ENSMUST00000199275 2472 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.83□□□□□ -1.48
Pcdh1F7BJK1 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Mir674-201ENSMUST00000102421 100 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm14981-201ENSMUST00000117325 943 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm15310-201ENSMUST00000117891 372 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm12677-201ENSMUST00000118668 426 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm11653-201ENSMUST00000119992 1009 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm14411-201ENSMUST00000121798 914 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm15877-201ENSMUST00000121897 964 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm12819-201ENSMUST00000122223 629 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm24442-201ENSMUST00000157238 327 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm24444-201ENSMUST00000157244 308 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm22390-201ENSMUST00000157588 325 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm26159-201ENSMUST00000158968 104 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm17137-202ENSMUST00000165729 957 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm23810-201ENSMUST00000175150 74 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm6113-201ENSMUST00000180319 639 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28739-201ENSMUST00000185415 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28219-201ENSMUST00000185452 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28303-201ENSMUST00000185642 747 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29244-201ENSMUST00000185825 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29437-201ENSMUST00000185865 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm29412-201ENSMUST00000185869 696 ntBASIC5.82□□□□□ -1.48
Pcdh1F7BJK1 Gm28910-201ENSMUST00000185921 696 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms