Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm11369-201ENSMUST00000120812 318 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm24477-201ENSMUST00000157438 103 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm23662-201ENSMUST00000158046 111 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm22326-201ENSMUST00000158897 351 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Scarna10-201ENSMUST00000158992 325 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm38181-201ENSMUST00000181357 720 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm44432-201ENSMUST00000203342 938 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm45596-201ENSMUST00000209279 434 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm20786-201ENSMUST00000212649 436 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm19195-201ENSMUST00000222018 511 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Trim3Q9R1R2 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm14769-201ENSMUST00000118590 432 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm14679-201ENSMUST00000121536 722 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm23280-201ENSMUST00000157905 139 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm24731-201ENSMUST00000158227 131 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm21654-201ENSMUST00000188086 691 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm2367-201ENSMUST00000192374 472 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm38185-201ENSMUST00000193195 694 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm37235-201ENSMUST00000195171 59 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm45157-201ENSMUST00000208729 401 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm8288-201ENSMUST00000223406 593 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim3Q9R1R2 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.28□□□□□ -1.56
Trim3Q9R1R2 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 126.1 ms