Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm42483-201ENSMUST00000197556 1742 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm24430-201ENSMUST00000104077 104 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm15087-201ENSMUST00000117465 1172 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm13545-201ENSMUST00000119044 482 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm13245-201ENSMUST00000119646 260 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm11383-201ENSMUST00000121346 807 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm15096-201ENSMUST00000121918 878 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm24647-201ENSMUST00000157112 113 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm22101-201ENSMUST00000157928 103 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm22206-201ENSMUST00000158612 116 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm23149-201ENSMUST00000158837 230 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm6428-201ENSMUST00000161062 345 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm15914-201ENSMUST00000161922 309 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm6074-201ENSMUST00000193340 451 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm2505-201ENSMUST00000200413 825 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm33178-201ENSMUST00000212090 257 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 AC174797.3-202ENSMUST00000224578 587 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm25852-201ENSMUST00000082790 130 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 AC122887.2-201ENSMUST00000219465 1603 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Pramel-201ENSMUST00000118979 1383 ntBASIC6.57□□□□□ -1.36
Trim39Q9ESN2 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Trim39Q9ESN2 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms