Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.56□□□□□ -1.36
Syne4Q8CII8 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Syne4Q8CII8 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.56□□□□□ -1.36
Syne4Q8CII8 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm12287-201ENSMUST00000119770 707 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm9208-201ENSMUST00000120468 948 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm12731-201ENSMUST00000120932 268 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm12267-201ENSMUST00000121609 761 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm23546-201ENSMUST00000158211 137 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm17086-201ENSMUST00000171346 484 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm44370-201ENSMUST00000175436 112 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm26731-201ENSMUST00000180683 543 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm27543-201ENSMUST00000183562 177 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm28385-201ENSMUST00000185671 292 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm6546-201ENSMUST00000192096 766 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm38330-201ENSMUST00000192743 959 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm44865-201ENSMUST00000207240 531 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm20368-201ENSMUST00000220716 301 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Zfp429-203ENSMUST00000224684 524 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm26437-201ENSMUST00000082595 105 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.55□□□□□ -1.36
Syne4Q8CII8 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Syne4Q8CII8 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm11833-201ENSMUST00000118393 853 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm11826-201ENSMUST00000118781 438 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm14788-201ENSMUST00000119457 375 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm14472-201ENSMUST00000119815 282 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm11925-201ENSMUST00000121375 535 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm25109-201ENSMUST00000122474 114 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm25383-201ENSMUST00000157810 144 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm25026-201ENSMUST00000175017 188 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm38018-201ENSMUST00000195651 540 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm29815-201ENSMUST00000202418 178 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm44845-201ENSMUST00000208773 335 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Gm45660-201ENSMUST00000210267 151 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.54□□□□□ -1.36
Syne4Q8CII8 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms