Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ClpbQ60649 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ClpbQ60649 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ClpbQ60649 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ClpbQ60649 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.6□□□□□ -1.51
ClpbQ60649 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.6□□□□□ -1.51
ClpbQ60649 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.6□□□□□ -1.51
ClpbQ60649 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
ClpbQ60649 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
ClpbQ60649 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm13641-201ENSMUST00000117993 473 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm15741-201ENSMUST00000119401 754 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.59□□□□□ -1.51
ClpbQ60649 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm23408-201ENSMUST00000158523 265 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Mirt2-201ENSMUST00000175179 285 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ClpbQ60649 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Mir6398-201ENSMUST00000184541 102 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm27219-201ENSMUST00000184633 742 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Trbv28-201ENSMUST00000192804 264 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm38268-201ENSMUST00000195813 193 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm44463-201ENSMUST00000198895 137 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm44360-201ENSMUST00000200081 82 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ClpbQ60649 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ClpbQ60649 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Mir298-201ENSMUST00000083476 82 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm25515-201ENSMUST00000083858 157 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Gm10780-201ENSMUST00000099459 285 ntBASIC5.59□□□□□ -1.51
ClpbQ60649 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ClpbQ60649 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
ClpbQ60649 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ClpbQ60649 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm42479-201ENSMUST00000198654 1356 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.58□□□□□ -1.52
ClpbQ60649 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
ClpbQ60649 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm11105-201ENSMUST00000112781 478 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Mir466i-201ENSMUST00000116924 121 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Gm12638-201ENSMUST00000119531 298 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Gm14842-201ENSMUST00000119577 269 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Gm12813-201ENSMUST00000119615 902 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Gm15331-201ENSMUST00000120225 385 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ClpbQ60649 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.58□□□□□ -1.52
ClpbQ60649 Gm24719-201ENSMUST00000157520 110 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Atp2b4-208ENSMUST00000167348 243 ntBASIC5.58□□□□□ -1.52
ClpbQ60649 Gm21772-201ENSMUST00000169213 478 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms