Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm22725-201ENSMUST00000158092 110 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm23023-201ENSMUST00000158767 109 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 AC125539.2-202ENSMUST00000227983 587 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 AC125539.2-201ENSMUST00000228339 753 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm22020-201ENSMUST00000104358 136 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm16149-201ENSMUST00000117631 309 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm16345-201ENSMUST00000146065 158 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm27834-201ENSMUST00000183427 125 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm6717-201ENSMUST00000185549 838 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm43919-201ENSMUST00000204303 364 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm45610-201ENSMUST00000209227 784 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.81□□□□□ -1.32
Shank3Q4ACU6 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Gm3531-201ENSMUST00000162698 489 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Gm37973-201ENSMUST00000195767 1289 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.8□□□□□ -1.32
Shank3Q4ACU6 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Shank3Q4ACU6 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gm9687-201ENSMUST00000189312 602 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gm36986-201ENSMUST00000195320 353 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gm18150-201ENSMUST00000195341 645 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gm29785-201ENSMUST00000217033 383 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Olfr151-202ENSMUST00000221099 929 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.79□□□□□ -1.32
Shank3Q4ACU6 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms