Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Gm4725-201ENSMUST00000151048 587 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm17655-201ENSMUST00000167969 255 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm9890-201ENSMUST00000171867 537 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm26381-201ENSMUST00000174895 92 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Mirt2-201ENSMUST00000175179 285 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm5139-201ENSMUST00000175943 249 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm22420-201ENSMUST00000178795 126 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm28017-201ENSMUST00000183434 126 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Gm37241-201ENSMUST00000191736 523 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox9Q04887 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm5995-201ENSMUST00000204107 1273 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm8209-201ENSMUST00000206386 553 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox9Q04887 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Gm8863-201ENSMUST00000216630 926 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox9Q04887 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox9Q04887 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.49□□□□□ -1.37
Sox9Q04887 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox9Q04887 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.49□□□□□ -1.37
Sox9Q04887 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox9Q04887 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox9Q04887 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox9Q04887 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox9Q04887 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox9Q04887 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox9Q04887 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.48□□□□□ -1.37
Sox9Q04887 Cmah-208ENSMUST00000224819 9482 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sox9Q04887 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Mir708-201ENSMUST00000102189 109 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Mir1188-201ENSMUST00000116756 120 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm12734-201ENSMUST00000120228 948 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm13998-201ENSMUST00000120952 335 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm11385-201ENSMUST00000121513 570 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Mir1970-201ENSMUST00000157839 104 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm23280-201ENSMUST00000157905 139 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm23031-201ENSMUST00000157998 119 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm23317-201ENSMUST00000157999 129 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm18560-201ENSMUST00000173463 1123 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sox9Q04887 Mir6992-201ENSMUST00000183342 109 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm27985-201ENSMUST00000185112 378 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm21728-201ENSMUST00000188442 695 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm21889-201ENSMUST00000188487 695 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm21920-201ENSMUST00000190042 695 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm37689-201ENSMUST00000193139 275 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm18843-201ENSMUST00000194982 719 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm4859-201ENSMUST00000199625 787 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm18007-201ENSMUST00000205019 844 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm6230-201ENSMUST00000208077 780 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.48□□□□□ -1.37
Sox9Q04887 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm6049-201ENSMUST00000222369 458 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.48□□□□□ -1.37
Sox9Q04887 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Sox9Q04887 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sox9Q04887 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sox9Q04887 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sox9Q04887 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox9Q04887 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Sox9Q04887 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms