Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm38149-201ENSMUST00000191943 339 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm38221-201ENSMUST00000195146 365 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm23011-202ENSMUST00000197855 275 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm43929-201ENSMUST00000203025 409 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm29817-201ENSMUST00000210098 172 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm45690-201ENSMUST00000210775 246 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.62□□□□□ -1.51
Col8a1Q00780 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm9800-201ENSMUST00000052615 336 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm24268-201ENSMUST00000082990 110 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Col8a1Q00780 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm42536-201ENSMUST00000197562 1613 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm24473-201ENSMUST00000104483 131 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm12643-201ENSMUST00000116078 374 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm12889-201ENSMUST00000118684 241 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm12901-201ENSMUST00000118690 532 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm7058-201ENSMUST00000119209 902 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm14614-201ENSMUST00000119873 384 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm11343-201ENSMUST00000120579 599 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm6373-201ENSMUST00000121026 360 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.61□□□□□ -1.51
Col8a1Q00780 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Igkv17-134-201ENSMUST00000168310 348 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm25065-201ENSMUST00000177914 132 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm25891-201ENSMUST00000180050 132 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm22917-201ENSMUST00000180116 110 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm27588-201ENSMUST00000185096 263 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm18849-201ENSMUST00000189861 560 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm42580-201ENSMUST00000197223 753 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm42886-201ENSMUST00000199214 466 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm5154-201ENSMUST00000203971 399 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm44795-201ENSMUST00000205496 319 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm33626-201ENSMUST00000206790 828 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm18877-201ENSMUST00000207706 539 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm4548-201ENSMUST00000208487 509 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm2961-201ENSMUST00000211074 772 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Gm19232-201ENSMUST00000211621 652 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.61□□□□□ -1.51
Col8a1Q00780 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms