Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm22807-201ENSMUST00000082737 129 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm23459-201ENSMUST00000083259 131 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm42510-201ENSMUST00000196470 2258 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm37880-201ENSMUST00000192216 3257 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 AC120375.1-201ENSMUST00000227034 3612 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm43175-201ENSMUST00000198450 3810 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 AC137871.4-201ENSMUST00000226323 3901 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm38372-201ENSMUST00000194854 4028 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm37773-201ENSMUST00000194141 2120 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm5405-201ENSMUST00000120478 609 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm7670-201ENSMUST00000121272 641 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm8032-201ENSMUST00000171009 574 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Mir3062-201ENSMUST00000174986 105 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm28353-201ENSMUST00000186482 570 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm28533-201ENSMUST00000186741 570 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm28061-201ENSMUST00000189085 807 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm44456-201ENSMUST00000196554 89 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm43779-201ENSMUST00000196691 829 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm6520-201ENSMUST00000200636 410 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm8291-201ENSMUST00000209635 1261 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm19256-201ENSMUST00000218550 231 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm40692-201ENSMUST00000220411 491 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 AC141425.1-201ENSMUST00000224989 265 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 AC154846.2-201ENSMUST00000228805 424 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm7808-201ENSMUST00000082002 387 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Gm43485-201ENSMUST00000199292 1710 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.85□□□□□ -1.63
Nkx3-1P97436 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Nkx3-1P97436 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm45493-201ENSMUST00000209494 3948 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Fam26d-202ENSMUST00000218239 3075 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm42998-201ENSMUST00000197053 2371 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm14472-201ENSMUST00000119815 282 ntBASIC4.84□□□□□ -1.63
Nkx3-1P97436 Gm11677-201ENSMUST00000121349 977 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms