Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.06□□□□□ -1.44
NcanP55066 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NcanP55066 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.06□□□□□ -1.44
NcanP55066 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm14158-201ENSMUST00000118409 308 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm11774-201ENSMUST00000118601 293 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm25430-201ENSMUST00000157614 289 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm38053-201ENSMUST00000193938 160 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm44053-201ENSMUST00000203364 929 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm43919-201ENSMUST00000204303 364 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.06□□□□□ -1.44
NcanP55066 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.06□□□□□ -1.44
NcanP55066 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.06□□□□□ -1.44
NcanP55066 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.06□□□□□ -1.44
NcanP55066 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.06□□□□□ -1.44
NcanP55066 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.06□□□□□ -1.44
NcanP55066 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.06□□□□□ -1.44
NcanP55066 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NcanP55066 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.06□□□□□ -1.44
NcanP55066 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.06□□□□□ -1.44
NcanP55066 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NcanP55066 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
NcanP55066 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.05□□□□□ -1.44
NcanP55066 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Gm22710-201ENSMUST00000116892 125 ntBASIC6.05□□□□□ -1.44
NcanP55066 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.05□□□□□ -1.44
NcanP55066 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.05□□□□□ -1.44
NcanP55066 Gm22235-201ENSMUST00000157085 110 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm22885-201ENSMUST00000157410 107 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.05□□□□□ -1.44
NcanP55066 Gm21070-201ENSMUST00000182425 985 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm27158-201ENSMUST00000183813 238 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm27541-201ENSMUST00000184078 122 ntBASIC6.05□□□□□ -1.44
NcanP55066 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Gm6717-201ENSMUST00000185549 838 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm19891-201ENSMUST00000189771 303 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Gm45215-201ENSMUST00000206407 395 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm45228-201ENSMUST00000206585 352 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm45209-201ENSMUST00000207122 353 ntBASIC6.05□□□□□ -1.44
NcanP55066 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.05□□□□□ -1.44
NcanP55066 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NcanP55066 Gm24706-201ENSMUST00000082806 137 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.05□□□□□ -1.44
NcanP55066 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.05□□□□□ -1.44
NcanP55066 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
NcanP55066 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NcanP55066 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.05□□□□□ -1.44
NcanP55066 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.05□□□□□ -1.44
NcanP55066 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.04□□□□□ -1.44
NcanP55066 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.04□□□□□ -1.44
NcanP55066 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
NcanP55066 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.04□□□□□ -1.44
NcanP55066 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 121.4 ms