Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm10784-201ENSMUST00000178715 238 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC7.65□□□□□ -1.18
Col18a1P39061 Gm8703-201ENSMUST00000203793 730 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 AC127302.1-201ENSMUST00000215973 1111 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm8942-201ENSMUST00000217892 400 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 AC155808.1-201ENSMUST00000219288 409 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 AC165347.1-201ENSMUST00000224089 1025 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 AC162857.1-201ENSMUST00000226614 400 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
Col18a1P39061 Gm24035-201ENSMUST00000082867 107 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm23511-201ENSMUST00000083084 164 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm44586-201ENSMUST00000207166 2737 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col18a1P39061 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col18a1P39061 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col18a1P39061 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Col18a1P39061 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col18a1P39061 Gm232-201ENSMUST00000216549 2559 ntBASIC7.65□□□□□ -1.19
Col18a1P39061 Gm29293-201ENSMUST00000189416 2188 ntBASIC7.65□□□□□ -1.19
Col18a1P39061 Gm37773-201ENSMUST00000194141 2120 ntBASIC7.65□□□□□ -1.19
Col18a1P39061 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col18a1P39061 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col18a1P39061 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm23692-201ENSMUST00000101881 160 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm25179-201ENSMUST00000122632 128 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC7.64□□□□□ -1.19
Col18a1P39061 Rab26os-201ENSMUST00000176215 477 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm28064-201ENSMUST00000185639 858 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm6321-201ENSMUST00000194460 1090 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm37882-201ENSMUST00000195254 196 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm38268-201ENSMUST00000195813 193 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col18a1P39061 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col18a1P39061 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm15170-201ENSMUST00000121593 2023 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm37598-201ENSMUST00000194506 1301 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col18a1P39061 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm12190-201ENSMUST00000120001 187 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm11255-201ENSMUST00000120448 1180 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm15077-201ENSMUST00000122344 362 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm24628-201ENSMUST00000122761 289 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm16345-201ENSMUST00000146065 158 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm22668-201ENSMUST00000158716 260 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm23777-201ENSMUST00000158994 259 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm27033-201ENSMUST00000183226 544 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Mir6899-201ENSMUST00000184798 64 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col18a1P39061 Gm34176-201ENSMUST00000192621 474 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm37716-201ENSMUST00000193553 947 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm37336-202ENSMUST00000193705 468 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm43005-201ENSMUST00000199015 648 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm4714-201ENSMUST00000203395 279 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm45700-201ENSMUST00000205866 347 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm10988-201ENSMUST00000209150 1088 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col18a1P39061 AC158955.1-201ENSMUST00000227140 385 ntBASIC7.64□□□□□ -1.19
Col18a1P39061 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col18a1P39061 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 AC139754.3-201ENSMUST00000220444 1627 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Gm45413-201ENSMUST00000210389 3538 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.63□□□□□ -1.19
Col18a1P39061 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col18a1P39061 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col18a1P39061 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms