Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lire1P11260 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lire1P11260 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.69□□□□□ -1.5
Lire1P11260 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm9529-201ENSMUST00000177598 579 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Mir6971-201ENSMUST00000183497 63 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Mir7020-201ENSMUST00000183787 70 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Mir7220-201ENSMUST00000183978 60 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.69□□□□□ -1.5
Lire1P11260 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm37380-201ENSMUST00000193752 397 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm8874-201ENSMUST00000196826 286 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Gm43354-201ENSMUST00000196862 346 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Gm43501-201ENSMUST00000202513 107 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Gm45008-201ENSMUST00000206420 493 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Gm44603-201ENSMUST00000206820 367 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Gm18805-201ENSMUST00000206872 655 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Gm3266-201ENSMUST00000217832 591 ntBASIC5.69□□□□□ -1.5
Lire1P11260 AC132433.1-201ENSMUST00000221553 1101 ntBASIC5.69□□□□□ -1.5
Lire1P11260 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.69□□□□□ -1.5
Lire1P11260 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.69□□□□□ -1.5
Lire1P11260 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.69□□□□□ -1.5
Lire1P11260 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.69□□□□□ -1.5
Lire1P11260 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lire1P11260 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.69□□□□□ -1.5
Lire1P11260 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.69□□□□□ -1.5
Lire1P11260 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lire1P11260 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lire1P11260 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lire1P11260 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Lire1P11260 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lire1P11260 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Lire1P11260 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Lire1P11260 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Gm26289-201ENSMUST00000104169 131 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm22371-201ENSMUST00000104588 130 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm14998-201ENSMUST00000120502 495 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 Gm25057-201ENSMUST00000157366 88 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Mir1960-201ENSMUST00000157488 78 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm16557-201ENSMUST00000159182 191 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Gm27193-201ENSMUST00000184217 586 ntBASIC5.68□□□□□ -1.5
Lire1P11260 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lire1P11260 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lire1P11260 Gm29551-201ENSMUST00000190913 698 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm8454-201ENSMUST00000196980 811 ntBASIC5.68□□□□□ -1.5
Lire1P11260 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 247.6 ms