Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TnfP06804 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.86□□□□□ -1.47
TnfP06804 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.86□□□□□ -1.47
TnfP06804 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
TnfP06804 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.86□□□□□ -1.47
TnfP06804 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TnfP06804 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
TnfP06804 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.85□□□□□ -1.47
TnfP06804 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TnfP06804 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
TnfP06804 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
TnfP06804 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
TnfP06804 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.85□□□□□ -1.47
TnfP06804 Gm11825-201ENSMUST00000120710 736 ntBASIC5.85□□□□□ -1.47
TnfP06804 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.85□□□□□ -1.47
TnfP06804 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.85□□□□□ -1.47
TnfP06804 Gm29592-201ENSMUST00000189434 370 ntBASIC5.85□□□□□ -1.47
TnfP06804 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.85□□□□□ -1.47
TnfP06804 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.85□□□□□ -1.47
TnfP06804 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.85□□□□□ -1.47
TnfP06804 AC134860.4-201ENSMUST00000223592 978 ntBASIC5.85□□□□□ -1.47
TnfP06804 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.85□□□□□ -1.47
TnfP06804 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TnfP06804 Gm23511-201ENSMUST00000083084 164 ntBASIC5.85□□□□□ -1.47
TnfP06804 Gm23459-201ENSMUST00000083259 131 ntBASIC5.85□□□□□ -1.47
TnfP06804 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TnfP06804 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Gm18853-201ENSMUST00000183629 3596 ntBASIC5.85□□□□□ -1.47
TnfP06804 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TnfP06804 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.84□□□□□ -1.47
TnfP06804 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TnfP06804 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
TnfP06804 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TnfP06804 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.84□□□□□ -1.47
TnfP06804 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.84□□□□□ -1.47
TnfP06804 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TnfP06804 Gm9429-201ENSMUST00000117804 868 ntBASIC5.84□□□□□ -1.47
TnfP06804 Gm11975-201ENSMUST00000118772 481 ntBASIC5.84□□□□□ -1.47
TnfP06804 Gm26211-201ENSMUST00000158578 129 ntBASIC5.84□□□□□ -1.47
TnfP06804 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
TnfP06804 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.84□□□□□ -1.47
TnfP06804 Gm5139-201ENSMUST00000175943 249 ntBASIC5.84□□□□□ -1.47
TnfP06804 Gm27148-201ENSMUST00000185086 160 ntBASIC5.84□□□□□ -1.47
TnfP06804 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
TnfP06804 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.84□□□□□ -1.47
TnfP06804 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.84□□□□□ -1.47
TnfP06804 Gm6362-201ENSMUST00000217686 836 ntBASIC5.84□□□□□ -1.47
TnfP06804 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.84□□□□□ -1.47
TnfP06804 AV026068-231ENSMUST00000225862 482 ntBASIC5.84□□□□□ -1.47
TnfP06804 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.84□□□□□ -1.47
TnfP06804 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TnfP06804 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.84□□□□□ -1.47
TnfP06804 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TnfP06804 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.84□□□□□ -1.47
TnfP06804 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.84□□□□□ -1.47
TnfP06804 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TnfP06804 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TnfP06804 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.84□□□□□ -1.48
TnfP06804 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.84□□□□□ -1.48
TnfP06804 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TnfP06804 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TnfP06804 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TnfP06804 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.84□□□□□ -1.48
TnfP06804 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TnfP06804 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TnfP06804 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.83□□□□□ -1.48
TnfP06804 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TnfP06804 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TnfP06804 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.83□□□□□ -1.48
TnfP06804 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TnfP06804 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
TnfP06804 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TnfP06804 Gm15803-201ENSMUST00000120118 394 ntBASIC5.83□□□□□ -1.48
TnfP06804 Gm13430-201ENSMUST00000121366 288 ntBASIC5.83□□□□□ -1.48
TnfP06804 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.83□□□□□ -1.48
TnfP06804 Gm6872-201ENSMUST00000165001 700 ntBASIC5.83□□□□□ -1.48
TnfP06804 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TnfP06804 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TnfP06804 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms