Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
IghmP01872 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.07□□□□□ -1.6
IghmP01872 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.07□□□□□ -1.6
IghmP01872 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.07□□□□□ -1.6
IghmP01872 Gm3257-201ENSMUST00000207217 675 ntBASIC5.07□□□□□ -1.6
IghmP01872 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.07□□□□□ -1.6
IghmP01872 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.07□□□□□ -1.6
IghmP01872 AC129597.1-201ENSMUST00000223046 1234 ntBASIC5.07□□□□□ -1.6
IghmP01872 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.07□□□□□ -1.6
IghmP01872 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
IghmP01872 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.07□□□□□ -1.6
IghmP01872 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
IghmP01872 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.07□□□□□ -1.6
IghmP01872 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.07□□□□□ -1.6
IghmP01872 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.07□□□□□ -1.6
IghmP01872 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.07□□□□□ -1.6
IghmP01872 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.07□□□□□ -1.6
IghmP01872 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
IghmP01872 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
IghmP01872 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.06□□□□□ -1.6
IghmP01872 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.06□□□□□ -1.6
IghmP01872 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.06□□□□□ -1.6
IghmP01872 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.06□□□□□ -1.6
IghmP01872 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.06□□□□□ -1.6
IghmP01872 Gm26078-201ENSMUST00000104067 128 ntBASIC5.06□□□□□ -1.6
IghmP01872 Gm22374-201ENSMUST00000104583 132 ntBASIC5.06□□□□□ -1.6
IghmP01872 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
IghmP01872 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IghmP01872 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.06□□□□□ -1.6
IghmP01872 Gm26489-201ENSMUST00000157880 264 ntBASIC5.06□□□□□ -1.6
IghmP01872 Gm3216-201ENSMUST00000166927 486 ntBASIC5.06□□□□□ -1.6
IghmP01872 Gm3141-201ENSMUST00000168726 499 ntBASIC5.06□□□□□ -1.6
IghmP01872 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.06□□□□□ -1.6
IghmP01872 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.06□□□□□ -1.6
IghmP01872 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Gm8719-201ENSMUST00000203602 534 ntBASIC5.06□□□□□ -1.6
IghmP01872 Gm45246-201ENSMUST00000210820 367 ntBASIC5.06□□□□□ -1.6
IghmP01872 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.06□□□□□ -1.6
IghmP01872 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.06□□□□□ -1.6
IghmP01872 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.06□□□□□ -1.6
IghmP01872 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
IghmP01872 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
IghmP01872 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.06□□□□□ -1.6
IghmP01872 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
IghmP01872 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
IghmP01872 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.06□□□□□ -1.6
IghmP01872 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.06□□□□□ -1.6
IghmP01872 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
IghmP01872 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
IghmP01872 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.05□□□□□ -1.6
IghmP01872 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
IghmP01872 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
IghmP01872 Gm24265-201ENSMUST00000101833 141 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm12303-201ENSMUST00000119506 673 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm11278-201ENSMUST00000121002 997 ntBASIC5.05□□□□□ -1.6
IghmP01872 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.05□□□□□ -1.6
IghmP01872 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm25846-201ENSMUST00000158013 135 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm23115-201ENSMUST00000158480 108 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm16102-201ENSMUST00000160955 420 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm18199-201ENSMUST00000173820 835 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm20530-201ENSMUST00000174261 254 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm22122-201ENSMUST00000175147 200 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm24407-201ENSMUST00000177864 141 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm27820-201ENSMUST00000183628 175 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm27653-201ENSMUST00000185037 136 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.05□□□□□ -1.6
IghmP01872 Gm19029-201ENSMUST00000189923 564 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm37700-201ENSMUST00000192617 965 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.05□□□□□ -1.6
IghmP01872 Gm37308-201ENSMUST00000194684 100 ntBASIC5.05□□□□□ -1.6
IghmP01872 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.05□□□□□ -1.6
IghmP01872 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
IghmP01872 Gm44307-201ENSMUST00000204466 764 ntBASIC5.05□□□□□ -1.6
IghmP01872 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.05□□□□□ -1.6
IghmP01872 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms