Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Col6a3E9PWQ3 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm6011-201ENSMUST00000211736 1796 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm11987-201ENSMUST00000118524 381 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm4479-201ENSMUST00000178807 171 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm37581-201ENSMUST00000192371 988 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm13484-201ENSMUST00000120738 412 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm43235-201ENSMUST00000200121 297 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm32453-201ENSMUST00000204183 456 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Olfr1219-202ENSMUST00000213724 5669 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gm37364-201ENSMUST00000192533 3920 ntBASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a3E9PWQ3 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm22468-201ENSMUST00000116680 120 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm24505-201ENSMUST00000157682 126 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm23943-201ENSMUST00000179712 121 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm23014-201ENSMUST00000104144 130 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm18382-201ENSMUST00000194394 582 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm22059-201ENSMUST00000157544 104 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm33626-201ENSMUST00000206790 828 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a3E9PWQ3 Gm22053-201ENSMUST00000083394 200 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms