Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm11805-201ENSMUST00000121238 600 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm22530-201ENSMUST00000158820 118 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm43724-201ENSMUST00000197516 226 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Mir409-201ENSMUST00000198153 79 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm45215-201ENSMUST00000206407 395 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.7□□□□□ -1.5
Scn1aA2APX8 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn1aA2APX8 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1aA2APX8 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm14520-201ENSMUST00000119258 387 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm22261-201ENSMUST00000158691 324 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Mir6400-201ENSMUST00000184870 92 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Zfp429-203ENSMUST00000224684 524 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm23508-201ENSMUST00000083079 72 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm11447-201ENSMUST00000118983 858 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm11699-201ENSMUST00000119016 401 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm20397-201ENSMUST00000174520 362 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Gm44074-201ENSMUST00000204562 337 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 AC124183.1-201ENSMUST00000222367 2135 ntBASIC5.69□□□□□ -1.5
Scn1aA2APX8 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn1aA2APX8 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm24265-201ENSMUST00000101833 141 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm11894-201ENSMUST00000121579 328 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm12110-201ENSMUST00000121601 579 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm17907-201ENSMUST00000173150 710 ntBASIC5.68□□□□□ -1.5
Scn1aA2APX8 Gm22122-201ENSMUST00000175147 200 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms