Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cldn3Q9Z0G9 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Mir546-201ENSMUST00000102105 121 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm11737-201ENSMUST00000118713 468 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm15233-201ENSMUST00000118747 400 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm11761-201ENSMUST00000121392 445 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm11679-201ENSMUST00000121830 779 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm23958-201ENSMUST00000157207 105 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm6055-201ENSMUST00000180532 378 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm26970-201ENSMUST00000182990 964 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm27887-201ENSMUST00000184367 102 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm8826-201ENSMUST00000193161 948 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm44580-201ENSMUST00000206333 877 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm4032-201ENSMUST00000210886 487 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm45750-201ENSMUST00000211966 354 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cldn3Q9Z0G9 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm14563-201ENSMUST00000120571 354 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm13363-201ENSMUST00000122008 522 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm25152-201ENSMUST00000157117 114 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Mir3095-201ENSMUST00000175552 87 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm37336-202ENSMUST00000193705 468 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Mir219c-201ENSMUST00000199860 60 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm19174-201ENSMUST00000216944 956 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cldn3Q9Z0G9 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms