Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.41□□□□□ -1.54
Lima1Q9ERG0 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Lima1Q9ERG0 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm22374-201ENSMUST00000104583 132 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm11826-201ENSMUST00000118781 438 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm15331-201ENSMUST00000120225 385 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm15335-201ENSMUST00000122442 411 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm25291-201ENSMUST00000122795 144 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm24435-201ENSMUST00000157886 110 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Mir6989-201ENSMUST00000184812 65 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm3605-201ENSMUST00000185858 440 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm8419-201ENSMUST00000189886 412 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm43629-201ENSMUST00000201782 704 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm7499-201ENSMUST00000210423 813 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm6068-201ENSMUST00000222270 387 ntBASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Lima1Q9ERG0 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Lima1Q9ERG0 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.4□□□□□ -1.55
Lima1Q9ERG0 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Lima1Q9ERG0 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
Lima1Q9ERG0 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.4□□□□□ -1.55
Lima1Q9ERG0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm16394-201ENSMUST00000117289 675 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm13428-201ENSMUST00000117540 365 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm24687-201ENSMUST00000157758 241 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm25439-201ENSMUST00000158280 131 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm16531-201ENSMUST00000180658 967 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Mir7046-201ENSMUST00000183435 66 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm37444-201ENSMUST00000193605 439 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm44360-201ENSMUST00000200081 82 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm29781-201ENSMUST00000203862 478 ntBASIC5.39□□□□□ -1.55
Lima1Q9ERG0 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.39□□□□□ -1.55
Lima1Q9ERG0 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms