Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm12193-201ENSMUST00000117250 379 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm13428-201ENSMUST00000117540 365 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm9429-201ENSMUST00000117804 868 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm11852-201ENSMUST00000120806 222 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm12978-201ENSMUST00000121250 522 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm14368-201ENSMUST00000145305 415 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Mir1945-201ENSMUST00000157919 78 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm17223-201ENSMUST00000171413 481 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm8241-201ENSMUST00000189286 816 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm33571-201ENSMUST00000193271 657 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm37774-201ENSMUST00000194401 245 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm44392-201ENSMUST00000196758 115 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm5990-201ENSMUST00000203126 746 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 AC130547.1-201ENSMUST00000228079 1047 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 BC023105-201ENSMUST00000073997 1227 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.68□□□□□ -1.5
Msh4Q99MT2 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Msh4Q99MT2 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm10241-201ENSMUST00000117664 286 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm2288-201ENSMUST00000118560 638 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm25295-201ENSMUST00000122794 306 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Snora47-201ENSMUST00000157483 138 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm16557-201ENSMUST00000159182 191 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm2959-201ENSMUST00000169844 621 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm9671-201ENSMUST00000171502 547 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm27006-201ENSMUST00000182218 943 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm5886-202ENSMUST00000203957 522 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.67□□□□□ -1.5
Msh4Q99MT2 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 AC134864.1-201ENSMUST00000226326 511 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Msh4Q99MT2 Gm5229-201ENSMUST00000039375 354 ntBASIC5.67□□□□□ -1.5
Msh4Q99MT2 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms