Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.15□□□□□ -1.27
Clp1Q99LI9 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Clp1Q99LI9 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm14050-201ENSMUST00000117052 346 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm14624-201ENSMUST00000117746 192 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm14293-201ENSMUST00000118528 577 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm15791-201ENSMUST00000120365 319 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm26173-201ENSMUST00000158416 136 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm3111-201ENSMUST00000167426 490 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm22655-201ENSMUST00000174949 96 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm22857-201ENSMUST00000174969 134 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Mir5101-201ENSMUST00000175181 83 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Mir7235-201ENSMUST00000183796 56 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm18448-201ENSMUST00000186286 599 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm43392-201ENSMUST00000196560 434 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm44254-201ENSMUST00000204184 322 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 CR974485.1-201ENSMUST00000222408 402 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 AC170086.1-201ENSMUST00000225190 497 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 CT030662.2-201ENSMUST00000226942 805 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.14□□□□□ -1.27
Clp1Q99LI9 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.14□□□□□ -1.27
Clp1Q99LI9 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clp1Q99LI9 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clp1Q99LI9 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clp1Q99LI9 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Clp1Q99LI9 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clp1Q99LI9 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clp1Q99LI9 Gm43665-201ENSMUST00000198672 1659 ntBASIC7.13□□□□□ -1.27
Clp1Q99LI9 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC7.13□□□□□ -1.27
Clp1Q99LI9 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Clp1Q99LI9 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.13□□□□□ -1.27
Clp1Q99LI9 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Clp1Q99LI9 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms