Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm6472-201ENSMUST00000178147 651 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm27006-201ENSMUST00000182218 943 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm43090-201ENSMUST00000202459 314 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm7890-201ENSMUST00000204877 601 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm45070-201ENSMUST00000208100 246 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm4928-201ENSMUST00000219622 850 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 CT009733.1-203ENSMUST00000224033 451 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Brf1Q8CFK2 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm5073-201ENSMUST00000118222 820 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm6427-201ENSMUST00000118721 979 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm12189-201ENSMUST00000119779 912 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm8545-201ENSMUST00000120692 801 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm11446-201ENSMUST00000121319 866 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm22959-201ENSMUST00000122514 303 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm26000-201ENSMUST00000157991 107 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm26487-201ENSMUST00000158022 94 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm16557-201ENSMUST00000159182 191 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm27679-201ENSMUST00000184612 84 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm29513-201ENSMUST00000185741 202 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm29592-201ENSMUST00000189434 370 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm37908-201ENSMUST00000195828 470 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm31306-201ENSMUST00000197517 508 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm42926-201ENSMUST00000200496 697 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm31166-201ENSMUST00000209326 288 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm45485-201ENSMUST00000211229 357 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.9□□□□□ -1.3
Brf1Q8CFK2 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Brf1Q8CFK2 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Brf1Q8CFK2 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms