Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm18426-201ENSMUST00000191874 973 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm43992-201ENSMUST00000204358 197 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm5055-201ENSMUST00000215697 581 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 AC126043.1-201ENSMUST00000221304 1141 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Ccdc87Q8CDL9 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Ccdc87Q8CDL9 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Ccdc87Q8CDL9 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.34□□□□□ -1.4
Ccdc87Q8CDL9 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
Ccdc87Q8CDL9 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm42905-201ENSMUST00000196237 1611 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm8569-201ENSMUST00000117630 647 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm13493-201ENSMUST00000120318 493 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm14054-201ENSMUST00000120744 704 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm8061-201ENSMUST00000122380 350 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm26169-201ENSMUST00000158420 135 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm6541-201ENSMUST00000165542 561 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Adgrg4-206ENSMUST00000168724 531 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Samd15-201ENSMUST00000169669 1194 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm8902-201ENSMUST00000174341 1096 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm7166-201ENSMUST00000199715 303 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc87Q8CDL9 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 AC174797.3-203ENSMUST00000225749 2078 ntBASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm23311-201ENSMUST00000104152 134 ntBASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm16007-201ENSMUST00000117837 286 ntBASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm14580-201ENSMUST00000119122 718 ntBASIC6.32□□□□□ -1.4
Ccdc87Q8CDL9 Gm13991-201ENSMUST00000120190 648 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms