Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm6719-201ENSMUST00000202067 335 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gm2607-201ENSMUST00000212389 627 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC4.97□□□□□ -1.61
Col6a6Q8C6K9 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.61
Col6a6Q8C6K9 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC4.96□□□□□ -1.61
Col6a6Q8C6K9 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
Col6a6Q8C6K9 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a6Q8C6K9 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col6a6Q8C6K9 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
Col6a6Q8C6K9 Gm45426-201ENSMUST00000209393 3672 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm23879-201ENSMUST00000116874 126 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm12073-201ENSMUST00000117382 524 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm15006-201ENSMUST00000121419 1122 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm42542-201ENSMUST00000197978 268 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm7990-201ENSMUST00000212126 593 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm4963-201ENSMUST00000072718 378 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm6011-201ENSMUST00000211736 1796 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm13590-201ENSMUST00000120183 1588 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 AC152944.1-201ENSMUST00000220160 3101 ntBASIC4.96□□□□□ -1.62
Col6a6Q8C6K9 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm22899-201ENSMUST00000104540 131 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm7206-201ENSMUST00000117730 508 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm14000-201ENSMUST00000118670 233 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm25176-201ENSMUST00000122640 125 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm24188-201ENSMUST00000157980 108 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm23164-201ENSMUST00000175084 111 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm25534-201ENSMUST00000175365 125 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm19002-201ENSMUST00000192649 1012 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Mir5121-201ENSMUST00000198528 74 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm45610-201ENSMUST00000209227 784 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm2099-201ENSMUST00000220979 412 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 AC091783.2-201ENSMUST00000224626 740 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm16270-201ENSMUST00000160327 3238 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm8853-201ENSMUST00000198366 1344 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm7973-201ENSMUST00000122107 488 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm25942-201ENSMUST00000180080 110 ntBASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC4.95□□□□□ -1.62
Col6a6Q8C6K9 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms