Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm37433-201ENSMUST00000192695 678 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm37441-201ENSMUST00000194430 678 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm18702-201ENSMUST00000196923 588 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm43157-201ENSMUST00000198223 412 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm7832-201ENSMUST00000202613 880 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm31166-201ENSMUST00000209326 288 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 AC154419.1-201ENSMUST00000227627 272 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm23448-201ENSMUST00000083151 104 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm44735-201ENSMUST00000206197 1752 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Usp40Q8BWR4 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm18529-201ENSMUST00000193025 1257 ntBASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm44132-201ENSMUST00000205142 151 ntBASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.98□□□□□ -1.13
Usp40Q8BWR4 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 AC121542.1-201ENSMUST00000227245 721 ntBASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm37106-201ENSMUST00000193760 1532 ntBASIC7.98□□□□□ -1.13
Usp40Q8BWR4 Gm45493-201ENSMUST00000209494 3948 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm15531-201ENSMUST00000118062 252 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm13537-201ENSMUST00000120467 267 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm14413-201ENSMUST00000122158 408 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm16363-201ENSMUST00000132460 877 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm29240-201ENSMUST00000187248 286 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm6321-201ENSMUST00000194460 1090 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm5735-201ENSMUST00000207053 167 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm44688-201ENSMUST00000209083 537 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm8980-201ENSMUST00000140232 2197 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm37132-201ENSMUST00000195553 2238 ntBASIC7.97□□□□□ -1.13
Usp40Q8BWR4 Gm38299-201ENSMUST00000193214 3789 ntBASIC7.96□□□□□ -1.13
Usp40Q8BWR4 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.96□□□□□ -1.13
Usp40Q8BWR4 AC122357.3-201ENSMUST00000221260 2293 ntBASIC7.96□□□□□ -1.13
Usp40Q8BWR4 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Usp40Q8BWR4 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Usp40Q8BWR4 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC7.96□□□□□ -1.13
Usp40Q8BWR4 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.96□□□□□ -1.13
Usp40Q8BWR4 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Usp40Q8BWR4 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms