Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm18493-201ENSMUST00000192084 1612 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.34□□□□□ -1.4
Usp49Q6P9L4 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
Usp49Q6P9L4 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Usp49Q6P9L4 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Usp49Q6P9L4 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Usp49Q6P9L4 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm43567-201ENSMUST00000197581 1978 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm11984-201ENSMUST00000118142 766 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Anp32-ps-201ENSMUST00000118265 388 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm14106-201ENSMUST00000119382 438 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm23229-201ENSMUST00000157297 105 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm22724-201ENSMUST00000158091 127 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm4831-201ENSMUST00000174626 594 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm8419-201ENSMUST00000189886 412 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm38280-201ENSMUST00000192610 158 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm20770-201ENSMUST00000193474 694 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm20586-201ENSMUST00000210122 547 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm6056-201ENSMUST00000221253 488 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm9269-201ENSMUST00000221661 578 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 AC134439.2-201ENSMUST00000221950 467 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.33□□□□□ -1.4
Usp49Q6P9L4 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Usp49Q6P9L4 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm22194-201ENSMUST00000116869 95 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm13451-201ENSMUST00000117649 592 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm15331-201ENSMUST00000120225 385 ntBASIC6.32□□□□□ -1.4
Usp49Q6P9L4 Gm15335-201ENSMUST00000122442 411 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms