Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm8826-201ENSMUST00000193161 948 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm9480-201ENSMUST00000198038 616 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm43382-201ENSMUST00000198954 838 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Clec2j-202ENSMUST00000203658 606 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm44539-201ENSMUST00000206010 238 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Upf3bQ3ULL6 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Upf3bQ3ULL6 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.9□□□□□ -1.47
Upf3bQ3ULL6 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Upf3bQ3ULL6 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Upf3bQ3ULL6 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm13259-201ENSMUST00000120792 456 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm12936-201ENSMUST00000121439 301 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm15790-201ENSMUST00000161109 1251 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm44370-201ENSMUST00000175436 112 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm27030-201ENSMUST00000182551 464 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm29509-201ENSMUST00000185716 321 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm6828-201ENSMUST00000207902 1186 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm45249-201ENSMUST00000211021 348 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm32526-201ENSMUST00000221878 981 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Upf3bQ3ULL6 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm14925-201ENSMUST00000120611 438 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm12267-201ENSMUST00000121609 761 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm23225-201ENSMUST00000158121 114 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Scarna10-201ENSMUST00000158992 325 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm27754-201ENSMUST00000183340 126 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm18952-201ENSMUST00000194471 846 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm2926-201ENSMUST00000205625 239 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm2961-201ENSMUST00000211074 772 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm18247-201ENSMUST00000222937 601 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.88□□□□□ -1.47
Upf3bQ3ULL6 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms