Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.59□□□□□ -1.35
Col5a2Q3U962 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Col5a2Q3U962 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.59□□□□□ -1.35
Col5a2Q3U962 Gm12328-201ENSMUST00000118611 197 ntBASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm25179-201ENSMUST00000122632 128 ntBASIC6.59□□□□□ -1.36
Col5a2Q3U962 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm24628-201ENSMUST00000122761 289 ntBASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm29736-201ENSMUST00000198189 385 ntBASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Col5a2Q3U962 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.59□□□□□ -1.36
Col5a2Q3U962 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Col5a2Q3U962 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm42528-201ENSMUST00000200697 3418 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm23274-201ENSMUST00000104056 130 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm24350-201ENSMUST00000104163 133 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm9687-201ENSMUST00000189312 602 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm18150-201ENSMUST00000195341 645 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm9173-201ENSMUST00000198054 400 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm45405-201ENSMUST00000211544 609 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.58□□□□□ -1.36
Col5a2Q3U962 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col5a2Q3U962 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col5a2Q3U962 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm24469-201ENSMUST00000104487 131 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm22899-201ENSMUST00000104540 131 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm22488-201ENSMUST00000116811 127 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm12988-201ENSMUST00000119054 478 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm24188-201ENSMUST00000157980 108 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm44281-201ENSMUST00000203090 166 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm43919-201ENSMUST00000204303 364 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col5a2Q3U962 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm22220-201ENSMUST00000082671 149 ntBASIC6.57□□□□□ -1.36
Col5a2Q3U962 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col5a2Q3U962 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms