Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.08□□□□□ -1.44
NcanP55066 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.08□□□□□ -1.44
NcanP55066 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.08□□□□□ -1.44
NcanP55066 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm23485-201ENSMUST00000104181 155 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Gm11975-201ENSMUST00000118772 481 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm4234-201ENSMUST00000119747 714 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.08□□□□□ -1.44
NcanP55066 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Gm3170-201ENSMUST00000168753 850 ntBASIC6.08□□□□□ -1.44
NcanP55066 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm3348-201ENSMUST00000177813 850 ntBASIC6.08□□□□□ -1.44
NcanP55066 Mir7012-201ENSMUST00000183900 64 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm27611-201ENSMUST00000184690 108 ntBASIC6.08□□□□□ -1.44
NcanP55066 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm5734-201ENSMUST00000189787 913 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm19029-201ENSMUST00000189923 564 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm19002-201ENSMUST00000192649 1012 ntBASIC6.08□□□□□ -1.44
NcanP55066 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.08□□□□□ -1.44
NcanP55066 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.08□□□□□ -1.44
NcanP55066 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.08□□□□□ -1.44
NcanP55066 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.08□□□□□ -1.44
NcanP55066 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.08□□□□□ -1.44
NcanP55066 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.08□□□□□ -1.44
NcanP55066 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NcanP55066 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.08□□□□□ -1.44
NcanP55066 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Gm37205-201ENSMUST00000194820 2736 ntBASIC6.08□□□□□ -1.44
NcanP55066 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
NcanP55066 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.08□□□□□ -1.44
NcanP55066 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
NcanP55066 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
NcanP55066 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
NcanP55066 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NcanP55066 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
NcanP55066 Gm11633-201ENSMUST00000118176 444 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm11833-201ENSMUST00000118393 853 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm14769-201ENSMUST00000118590 432 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm7657-201ENSMUST00000118851 666 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm7973-201ENSMUST00000122107 488 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm25293-201ENSMUST00000122792 285 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Gm26098-201ENSMUST00000157247 288 ntBASIC6.07□□□□□ -1.44
NcanP55066 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Gm8221-201ENSMUST00000178052 564 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NcanP55066 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Gm28683-201ENSMUST00000187134 615 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm28840-205ENSMUST00000189320 615 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm28835-203ENSMUST00000190062 615 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm37670-201ENSMUST00000193622 229 ntBASIC6.07□□□□□ -1.44
NcanP55066 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC6.07□□□□□ -1.44
NcanP55066 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC6.07□□□□□ -1.44
NcanP55066 Gm25007-201ENSMUST00000083808 133 ntBASIC6.07□□□□□ -1.44
NcanP55066 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
NcanP55066 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NcanP55066 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.07□□□□□ -1.44
NcanP55066 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.07□□□□□ -1.44
NcanP55066 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NcanP55066 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NcanP55066 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NcanP55066 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NcanP55066 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms