Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm42961-201ENSMUST00000202023 181 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.42□□□□□ -1.54
Sox3P53784 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm2614-201ENSMUST00000223227 403 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Sox3P53784 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm10064-201ENSMUST00000071235 399 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Sox3P53784 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.41□□□□□ -1.54
Sox3P53784 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm22499-201ENSMUST00000104501 135 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm12074-201ENSMUST00000120189 219 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm13899-201ENSMUST00000121519 1255 ntBASIC5.41□□□□□ -1.54
Sox3P53784 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Gm20545-201ENSMUST00000174739 210 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Gm5430-201ENSMUST00000182525 915 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm27286-201ENSMUST00000184934 179 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm29284-201ENSMUST00000188363 255 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm42522-201ENSMUST00000196071 255 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Mir5121-201ENSMUST00000198528 74 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.41□□□□□ -1.54
Sox3P53784 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.41□□□□□ -1.54
Sox3P53784 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.41□□□□□ -1.54
Sox3P53784 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm23737-201ENSMUST00000082547 159 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.41□□□□□ -1.54
Sox3P53784 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Sox3P53784 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.41□□□□□ -1.54
Sox3P53784 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.41□□□□□ -1.54
Sox3P53784 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.41□□□□□ -1.54
Sox3P53784 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Sox3P53784 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox3P53784 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox3P53784 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Sox3P53784 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.4□□□□□ -1.54
Sox3P53784 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Sox3P53784 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms