Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm21524-201ENSMUST00000190499 696 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm21715-201ENSMUST00000191056 694 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm37884-201ENSMUST00000191857 818 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm43849-201ENSMUST00000201086 215 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm44221-201ENSMUST00000203552 388 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm5735-201ENSMUST00000207053 167 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm44849-201ENSMUST00000207595 484 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm5055-201ENSMUST00000215697 581 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 AC166323.1-201ENSMUST00000217756 367 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm8288-201ENSMUST00000223406 593 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 AC154730.1-201ENSMUST00000227874 816 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm24032-201ENSMUST00000083932 159 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm24272-201ENSMUST00000102329 98 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm26143-201ENSMUST00000104480 108 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm13998-201ENSMUST00000120952 335 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm11910-201ENSMUST00000121624 432 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm13669-201ENSMUST00000122366 457 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm24682-201ENSMUST00000158764 137 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Mir5128-201ENSMUST00000175217 84 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm24812-201ENSMUST00000175315 284 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm28614-201ENSMUST00000186483 458 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm37503-201ENSMUST00000192088 319 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm37463-201ENSMUST00000193819 796 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm5694-201ENSMUST00000195648 641 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm44163-201ENSMUST00000205140 475 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm44940-201ENSMUST00000206225 1247 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 AC133598.3-204ENSMUST00000224260 767 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 AC122459.2-201ENSMUST00000227099 638 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 AC174678.3-201ENSMUST00000227568 362 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.68□□□□□ -1.66
Nkx2-1P50220 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nkx2-1P50220 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms