Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm5372-201ENSMUST00000187540 409 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm42509-201ENSMUST00000197390 781 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm9655-201ENSMUST00000211321 1284 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 AC159476.2-201ENSMUST00000216221 418 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col18a1P39061 mt-Td-201ENSMUST00000082404 70 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col18a1P39061 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm43180-201ENSMUST00000197541 2886 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col18a1P39061 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 AC156031.1-201ENSMUST00000217288 2555 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm24469-201ENSMUST00000104487 131 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm14599-201ENSMUST00000120469 474 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm16363-201ENSMUST00000132460 877 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm18396-201ENSMUST00000177095 361 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm5511-201ENSMUST00000189380 802 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col18a1P39061 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm23626-201ENSMUST00000082458 133 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm23972-201ENSMUST00000083322 165 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col18a1P39061 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col18a1P39061 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Col18a1P39061 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col18a1P39061 AC154552.6-201ENSMUST00000221365 1342 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Col18a1P39061 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col18a1P39061 Gm12328-201ENSMUST00000118611 197 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm13338-201ENSMUST00000120235 361 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm14848-201ENSMUST00000121850 467 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm15878-201ENSMUST00000127561 306 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm6081-201ENSMUST00000134472 489 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Scarna13-201ENSMUST00000158164 275 ntBASIC7.65□□□□□ -1.18
Col18a1P39061 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Col18a1P39061 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms