Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LdlrP35951 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LdlrP35951 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.04□□□□□ -1.44
LdlrP35951 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LdlrP35951 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LdlrP35951 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LdlrP35951 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.03□□□□□ -1.44
LdlrP35951 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LdlrP35951 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm24434-201ENSMUST00000104081 132 ntBASIC6.03□□□□□ -1.44
LdlrP35951 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm13818-201ENSMUST00000119441 511 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm12825-201ENSMUST00000120249 563 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm13593-201ENSMUST00000121329 692 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm12618-201ENSMUST00000121754 483 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm17655-201ENSMUST00000167969 255 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.03□□□□□ -1.44
LdlrP35951 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm27512-201ENSMUST00000175328 126 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm21542-201ENSMUST00000182307 993 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Mir7220-201ENSMUST00000183978 60 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm6693-201ENSMUST00000189583 813 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Trbv28-201ENSMUST00000192804 264 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm43489-201ENSMUST00000196810 993 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.03□□□□□ -1.44
LdlrP35951 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LdlrP35951 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.03□□□□□ -1.44
LdlrP35951 AC069561.2-201ENSMUST00000217596 420 ntBASIC6.03□□□□□ -1.44
LdlrP35951 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 AC154552.5-201ENSMUST00000222352 207 ntBASIC6.03□□□□□ -1.44
LdlrP35951 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.03□□□□□ -1.44
LdlrP35951 AC154747.1-201ENSMUST00000225265 239 ntBASIC6.03□□□□□ -1.44
LdlrP35951 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.03□□□□□ -1.44
LdlrP35951 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LdlrP35951 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LdlrP35951 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LdlrP35951 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.03□□□□□ -1.44
LdlrP35951 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
LdlrP35951 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LdlrP35951 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
LdlrP35951 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.44
LdlrP35951 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
LdlrP35951 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.02□□□□□ -1.45
LdlrP35951 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LdlrP35951 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.02□□□□□ -1.45
LdlrP35951 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.02□□□□□ -1.45
LdlrP35951 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.02□□□□□ -1.45
LdlrP35951 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
LdlrP35951 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.02□□□□□ -1.45
LdlrP35951 Gm7206-201ENSMUST00000117730 508 ntBASIC6.02□□□□□ -1.45
LdlrP35951 Gm11212-201ENSMUST00000118337 618 ntBASIC6.02□□□□□ -1.45
LdlrP35951 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.02□□□□□ -1.45
LdlrP35951 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LdlrP35951 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms