Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a1P02463 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col4a1P02463 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a1P02463 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a1P02463 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
Col4a1P02463 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col4a1P02463 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.62□□□□□ -1.35
Col4a1P02463 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm37503-201ENSMUST00000192088 319 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 BX530055.1-201ENSMUST00000197285 122 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Gm18940-201ENSMUST00000222518 871 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Gm7040-201ENSMUST00000223271 443 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col4a1P02463 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm7416-201ENSMUST00000117448 1487 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Col4a1P02463 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 AC151734.1-201ENSMUST00000227023 1740 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm33378-201ENSMUST00000219831 2758 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col4a1P02463 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm23593-201ENSMUST00000104309 120 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm25179-201ENSMUST00000122632 128 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm24188-201ENSMUST00000157980 108 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Gm24186-201ENSMUST00000157983 127 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Mir6963-201ENSMUST00000183535 71 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Gm34224-201ENSMUST00000204606 364 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.61□□□□□ -1.35
Col4a1P02463 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col4a1P02463 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col4a1P02463 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.61□□□□□ -1.35
Col4a1P02463 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col4a1P02463 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col4a1P02463 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col4a1P02463 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.6□□□□□ -1.35
Col4a1P02463 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a1P02463 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.6□□□□□ -1.35
Col4a1P02463 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col4a1P02463 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.6□□□□□ -1.35
Col4a1P02463 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Col4a1P02463 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a1P02463 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a1P02463 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a1P02463 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a1P02463 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.6□□□□□ -1.35
Col4a1P02463 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col4a1P02463 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col4a1P02463 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Col4a1P02463 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.6□□□□□ -1.35
Col4a1P02463 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.6□□□□□ -1.35
Col4a1P02463 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.6□□□□□ -1.35
Col4a1P02463 Gm15501-202ENSMUST00000140687 625 ntBASIC6.6□□□□□ -1.35
Col4a1P02463 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms