Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm26419-201ENSMUST00000104272 133 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm12814-201ENSMUST00000117091 846 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm14513-201ENSMUST00000117403 123 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm12520-201ENSMUST00000117493 316 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm13983-201ENSMUST00000118018 865 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm14358-201ENSMUST00000118458 403 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm15193-201ENSMUST00000120224 865 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm12104-201ENSMUST00000120359 979 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm11726-201ENSMUST00000121028 424 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm14600-201ENSMUST00000121032 630 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm15885-201ENSMUST00000122114 388 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm24065-201ENSMUST00000157487 264 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm17177-201ENSMUST00000169144 483 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm20432-201ENSMUST00000173716 250 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm27317-201ENSMUST00000183533 95 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Mir7005-201ENSMUST00000185089 69 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm28114-201ENSMUST00000187232 379 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm18426-201ENSMUST00000191874 973 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm36932-201ENSMUST00000195226 929 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm43096-201ENSMUST00000196173 421 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm17893-201ENSMUST00000203017 770 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm43973-201ENSMUST00000203562 210 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm18838-201ENSMUST00000204855 886 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 AC160970.1-201ENSMUST00000219311 475 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 AC157017.1-201ENSMUST00000220148 364 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 n-R5s86-201ENSMUST00000083215 119 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh1F7BJK1 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms