Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm11386-201ENSMUST00000117761 347 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm11533-201ENSMUST00000120287 477 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm23117-201ENSMUST00000158482 108 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm23003-201ENSMUST00000179948 107 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm18291-201ENSMUST00000190791 301 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm37392-201ENSMUST00000192098 516 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm7478-201ENSMUST00000201054 581 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm44225-201ENSMUST00000203582 186 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm45478-201ENSMUST00000209472 211 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 AC154328.1-201ENSMUST00000225875 307 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim42Q9D2H5 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm11972-201ENSMUST00000118514 389 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm25434-201ENSMUST00000158278 167 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm7316-201ENSMUST00000165395 445 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm5929-201ENSMUST00000166883 487 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm9541-201ENSMUST00000188409 502 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.88□□□□□ -1.31
Trim42Q9D2H5 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms