Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm21542-201ENSMUST00000182307 993 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm5946-201ENSMUST00000182340 970 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm17952-201ENSMUST00000193914 747 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Gm45448-201ENSMUST00000211739 209 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 AC167222.2-201ENSMUST00000220014 295 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 CT954323.2-201ENSMUST00000222056 213 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 CT009733.1-201ENSMUST00000225322 425 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 AC105407.1-201ENSMUST00000225684 614 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 AC112972.1-201ENSMUST00000227329 365 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.89□□□□□ -1.47
Clrn1Q8K445 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Clrn1Q8K445 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm25346-201ENSMUST00000104509 128 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm2348-201ENSMUST00000108782 300 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm14173-201ENSMUST00000117690 278 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm12713-201ENSMUST00000118404 764 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm11617-201ENSMUST00000119609 639 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm12115-201ENSMUST00000119969 447 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm13720-201ENSMUST00000120741 196 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm8722-201ENSMUST00000121466 769 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm15885-201ENSMUST00000122114 388 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm22794-201ENSMUST00000157228 306 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm23205-201ENSMUST00000158671 103 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Mir5107-201ENSMUST00000175586 88 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm6472-201ENSMUST00000178147 651 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm25598-201ENSMUST00000179031 107 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm26557-201ENSMUST00000180756 493 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm8669-201ENSMUST00000183839 945 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm18426-201ENSMUST00000191874 973 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm37152-201ENSMUST00000193369 1175 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm7626-201ENSMUST00000195801 353 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm44952-201ENSMUST00000204443 433 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm44135-201ENSMUST00000205221 368 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm45658-201ENSMUST00000209197 580 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm45473-201ENSMUST00000211452 616 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms