Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Gm42615-201ENSMUST00000197704 1820 ntBASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Ccdc87Q8CDL9 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm11990-201ENSMUST00000121505 897 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm25117-201ENSMUST00000157194 144 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm22392-201ENSMUST00000177971 107 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Mir6973b-201ENSMUST00000184185 80 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm27998-201ENSMUST00000184902 361 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Mir703-201ENSMUST00000197105 109 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm9057-201ENSMUST00000198791 296 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm44091-201ENSMUST00000205212 649 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm45185-201ENSMUST00000207556 404 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm45474-201ENSMUST00000209471 408 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm45405-201ENSMUST00000211544 609 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm2614-201ENSMUST00000223227 403 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 AC133654.1-201ENSMUST00000228411 672 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm6863-201ENSMUST00000052882 636 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm26072-201ENSMUST00000083135 107 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm22444-201ENSMUST00000093693 108 ntBASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Ccdc87Q8CDL9 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Mir1192-201ENSMUST00000116976 121 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm16383-201ENSMUST00000118122 232 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm11510-201ENSMUST00000120278 347 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm14589-201ENSMUST00000121640 727 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm24343-201ENSMUST00000158708 111 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm5430-201ENSMUST00000182525 915 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc87Q8CDL9 Gm28926-201ENSMUST00000191063 680 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms