Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Cfap61-214ENSMUST00000167179 183 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm22242-201ENSMUST00000175224 118 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm29281-201ENSMUST00000188077 381 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm43141-201ENSMUST00000199695 274 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm8774-201ENSMUST00000203621 692 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm44411-201ENSMUST00000204172 349 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 AC105950.1-201ENSMUST00000222637 408 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 AC104832.1-201ENSMUST00000222938 550 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 AC163646.2-201ENSMUST00000227962 141 ntBASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim47Q8C0E3 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm7821-201ENSMUST00000117111 788 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm14769-201ENSMUST00000118590 432 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm13555-201ENSMUST00000121668 319 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm24176-201ENSMUST00000158928 121 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm6395-201ENSMUST00000167639 691 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm8479-201ENSMUST00000203825 718 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm44990-201ENSMUST00000203922 217 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm17822-201ENSMUST00000204307 351 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm45171-201ENSMUST00000206360 736 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm44856-201ENSMUST00000206639 304 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm18903-201ENSMUST00000215343 480 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm2754-201ENSMUST00000223383 589 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 AC131747.1-201ENSMUST00000226159 793 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 AC122858.1-201ENSMUST00000226212 433 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 AC154600.1-201ENSMUST00000226480 714 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm23614-201ENSMUST00000082598 107 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm26063-201ENSMUST00000083378 107 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 n-R5s168-201ENSMUST00000083948 104 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm42611-201ENSMUST00000199446 3407 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trim47Q8C0E3 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm44652-201ENSMUST00000208648 2854 ntBASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Zfp27-201ENSMUST00000053521 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Trim47Q8C0E3 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms