Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm6374-201ENSMUST00000159051 788 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm24465-201ENSMUST00000178398 107 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm27675-201ENSMUST00000184527 94 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm27421-201ENSMUST00000184729 167 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm2939-201ENSMUST00000198496 478 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm44233-201ENSMUST00000203616 226 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm7825-201ENSMUST00000204046 416 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 AC123944.1-201ENSMUST00000213414 160 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 AC134607.2-201ENSMUST00000213983 231 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim35Q8C006 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Pfdn5-202ENSMUST00000062492 464 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim35Q8C006 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Klk1b1-201ENSMUST00000078835 867 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm24616-201ENSMUST00000083274 139 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm24826-201ENSMUST00000083695 215 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.66□□□□□ -1.02
Trim35Q8C006 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Zfp180-202ENSMUST00000203854 3845 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Ms4a6c-201ENSMUST00000165310 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Nr1h3-201ENSMUST00000002177 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim35Q8C006 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trim35Q8C006 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Spdye4b-201ENSMUST00000031574 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Pax4-201ENSMUST00000031718 1370 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Nadk-202ENSMUST00000105612 2737 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 n-R5s165-201ENSMUST00000104074 100 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm23744-201ENSMUST00000104231 149 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm23266-201ENSMUST00000104444 134 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm25000-201ENSMUST00000117016 114 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm12564-201ENSMUST00000119860 321 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm22718-201ENSMUST00000122701 315 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm15410-201ENSMUST00000127763 544 ntTSL 5 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm14298-201ENSMUST00000139032 237 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm26279-201ENSMUST00000157095 102 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm22207-201ENSMUST00000158609 317 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm9120-201ENSMUST00000190835 994 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm23927-202ENSMUST00000199928 216 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm9967-202ENSMUST00000205660 361 ntTSL 3 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.65□□□□□ -1.02
Trim35Q8C006 AC188459.1-201ENSMUST00000216651 300 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm46197-201ENSMUST00000217530 416 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 AC134254.2-201ENSMUST00000221262 170 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 AC133087.1-201ENSMUST00000221837 148 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Olfr460-201ENSMUST00000051540 1061 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Tas2r138-201ENSMUST00000076565 996 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm26204-201ENSMUST00000082906 107 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Gm23239-201ENSMUST00000083006 181 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Mir130b-201ENSMUST00000083638 82 ntBASIC8.65□□□□□ -1.02
Trim35Q8C006 Defb23-201ENSMUST00000099206 624 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Trim35Q8C006 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Trim35Q8C006 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Recql-203ENSMUST00000111803 3389 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Teddm2-201ENSMUST00000059607 1654 ntAPPRIS P2 BASIC8.65□□□□□ -1.03
Trim35Q8C006 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.65□□□□□ -1.03
Trim35Q8C006 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Trim35Q8C006 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Acsbg2-201ENSMUST00000043062 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trim35Q8C006 Gm45280-201ENSMUST00000210484 2552 ntBASIC8.65□□□□□ -1.03
Trim35Q8C006 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Hnrnpk-224ENSMUST00000224182 2754 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Ddx47-201ENSMUST00000032326 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm27509-201ENSMUST00000102400 79 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms