Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm25363-201ENSMUST00000158850 245 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm6808-201ENSMUST00000162341 807 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Mir3572-201ENSMUST00000175549 86 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm26738-201ENSMUST00000181312 601 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm19124-201ENSMUST00000191041 832 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm44253-201ENSMUST00000203387 628 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm44582-201ENSMUST00000209125 445 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Upf3bQ3ULL6 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm14335-201ENSMUST00000119165 810 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm12303-201ENSMUST00000119506 673 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm25342-201ENSMUST00000157459 122 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm28507-201ENSMUST00000189737 703 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm28188-201ENSMUST00000190483 236 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm43033-201ENSMUST00000199682 425 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm45246-201ENSMUST00000210820 367 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm22807-201ENSMUST00000082737 129 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Upf3bQ3ULL6 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm22592-201ENSMUST00000104242 131 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm15715-201ENSMUST00000118032 283 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm11447-201ENSMUST00000118983 858 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm14472-201ENSMUST00000119815 282 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm6872-201ENSMUST00000165001 700 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm3216-201ENSMUST00000166927 486 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm3141-201ENSMUST00000168726 499 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm6223-201ENSMUST00000178436 871 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm27960-201ENSMUST00000183445 184 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm27148-201ENSMUST00000185086 160 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm29474-201ENSMUST00000187688 379 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm29376-201ENSMUST00000189357 835 ntBASIC5.9□□□□□ -1.46
Upf3bQ3ULL6 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms