Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Col17a1Q07563 Gm42607-201ENSMUST00000200221 3393 ntBASIC8.77□□□□□ -1
Col17a1Q07563 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Col17a1Q07563 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Col17a1Q07563 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC8.77□□□□□ -1
Col17a1Q07563 Mir466f-2-201ENSMUST00000104805 94 ntBASIC8.77□□□□□ -1
Col17a1Q07563 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col17a1Q07563 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col17a1Q07563 Gm25176-201ENSMUST00000122640 125 ntBASIC8.77□□□□□ -1
Col17a1Q07563 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC8.77□□□□□ -1
Col17a1Q07563 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Col17a1Q07563 AC132104.1-201ENSMUST00000213615 260 ntBASIC8.77□□□□□ -1
Col17a1Q07563 AC153899.1-201ENSMUST00000214092 1117 ntBASIC8.77□□□□□ -1
Col17a1Q07563 AC134439.1-201ENSMUST00000220923 600 ntBASIC8.77□□□□□ -1
Col17a1Q07563 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC8.77□□□□□ -1
Col17a1Q07563 AC125539.2-202ENSMUST00000227983 587 ntBASIC8.77□□□□□ -1
Col17a1Q07563 AC125539.2-201ENSMUST00000228339 753 ntBASIC8.77□□□□□ -1
Col17a1Q07563 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1
Col17a1Q07563 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col17a1Q07563 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm43360-201ENSMUST00000197656 2887 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm43314-201ENSMUST00000196744 2231 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm24935-201ENSMUST00000103770 110 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm15799-201ENSMUST00000120899 289 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.77□□□□□ -1.01
Col17a1Q07563 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm45700-201ENSMUST00000205866 347 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm44580-201ENSMUST00000206333 877 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm44603-201ENSMUST00000206820 367 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm45539-201ENSMUST00000210313 428 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 AC153968.2-201ENSMUST00000215579 1140 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 AC131743.3-201ENSMUST00000222099 662 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 AC116589.4-201ENSMUST00000222390 216 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.77□□□□□ -1.01
Col17a1Q07563 AC118006.2-201ENSMUST00000224167 962 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 AC156790.5-201ENSMUST00000227075 231 ntBASIC8.77□□□□□ -1.01
Col17a1Q07563 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col17a1Q07563 Gm9930-201ENSMUST00000066742 3151 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 AC170999.1-201ENSMUST00000226359 1585 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Scarna13-201ENSMUST00000158164 275 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Mir6414-201ENSMUST00000183685 82 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm10925-201ENSMUST00000189941 678 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm37088-201ENSMUST00000193887 406 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col17a1Q07563 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col17a1Q07563 Gm37049-201ENSMUST00000194356 1983 ntBASIC8.76□□□□□ -1.01
Col17a1Q07563 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.75□□□□□ -1.01
Col17a1Q07563 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.75□□□□□ -1.01
Col17a1Q07563 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms