Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm7739-201ENSMUST00000221131 1560 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm38090-201ENSMUST00000195733 1942 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm6746-201ENSMUST00000108774 483 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm7834-201ENSMUST00000117560 437 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm11976-201ENSMUST00000119236 295 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm11410-201ENSMUST00000120053 1143 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm14489-201ENSMUST00000120868 901 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.27□□□□□ -1.41
Msx2Q03358 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm23981-201ENSMUST00000157136 106 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm25057-201ENSMUST00000157366 88 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm25553-201ENSMUST00000158076 79 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm22523-201ENSMUST00000158696 100 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm44370-201ENSMUST00000175436 112 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm24923-201ENSMUST00000178201 88 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Pea15b-201ENSMUST00000182806 387 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm21392-201ENSMUST00000182950 972 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm29214-201ENSMUST00000190216 570 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm38373-201ENSMUST00000192042 288 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm18407-201ENSMUST00000192126 790 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm43812-202ENSMUST00000202701 581 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm43973-201ENSMUST00000203562 210 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm44590-201ENSMUST00000206161 391 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC6.27□□□□□ -1.41
Msx2Q03358 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC6.27□□□□□ -1.41
Msx2Q03358 AC124399.1-201ENSMUST00000218334 590 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm2544-201ENSMUST00000222702 756 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm9293-201ENSMUST00000223096 306 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 AC151730.2-201ENSMUST00000224027 475 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm21731-201ENSMUST00000079524 489 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm42536-201ENSMUST00000197562 1613 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Msx2Q03358 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.27□□□□□ -1.41
Msx2Q03358 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Msx2Q03358 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Msx2Q03358 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Msx2Q03358 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Msx2Q03358 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Msx2Q03358 Gm3675-201ENSMUST00000175904 1653 ntBASIC6.26□□□□□ -1.41
Msx2Q03358 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Msx2Q03358 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Msx2Q03358 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Msx2Q03358 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Msx2Q03358 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Msx2Q03358 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms