Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm15189-201ENSMUST00000121164 1966 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm43019-201ENSMUST00000196948 2863 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm43953-201ENSMUST00000203709 2867 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm29670-201ENSMUST00000190228 2491 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm25917-201ENSMUST00000104267 130 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm11905-201ENSMUST00000117653 678 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm15152-201ENSMUST00000121540 394 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm15959-201ENSMUST00000121724 368 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm8648-201ENSMUST00000122457 221 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm3160-201ENSMUST00000128343 607 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm23760-201ENSMUST00000158350 116 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Scarna6-201ENSMUST00000158656 265 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm16164-201ENSMUST00000160078 468 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm17177-201ENSMUST00000169144 483 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm20397-201ENSMUST00000174520 362 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm27315-201ENSMUST00000183977 154 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm8524-201ENSMUST00000186232 379 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm28997-201ENSMUST00000188759 429 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm29525-201ENSMUST00000189844 699 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm28803-201ENSMUST00000190385 764 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm28620-201ENSMUST00000190463 439 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm29523-201ENSMUST00000191415 699 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm18805-201ENSMUST00000206872 655 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm18469-201ENSMUST00000208850 439 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 AV026068-216ENSMUST00000223874 328 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 AV026068-218ENSMUST00000223980 575 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 AC121997.2-202ENSMUST00000227158 939 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm2531-201ENSMUST00000075609 512 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm22865-201ENSMUST00000083949 214 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm20768-201ENSMUST00000199527 2338 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.64□□□□□ -1.51
Col8a1Q00780 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
Col8a1Q00780 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col8a1Q00780 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm42671-201ENSMUST00000198013 1604 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm25422-201ENSMUST00000104219 129 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm13890-201ENSMUST00000117578 390 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms