Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Nkx3-1P97436 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm45413-201ENSMUST00000210389 3538 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm8141-201ENSMUST00000190856 1723 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm45179-201ENSMUST00000208452 4337 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm15583-201ENSMUST00000116191 3510 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm8595-201ENSMUST00000118250 630 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm13679-201ENSMUST00000118678 484 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm15741-201ENSMUST00000119401 754 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm14601-201ENSMUST00000120892 236 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm13007-201ENSMUST00000121866 365 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm43078-201ENSMUST00000197222 168 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm44330-201ENSMUST00000200106 143 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm5735-201ENSMUST00000207053 167 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm6702-201ENSMUST00000208496 471 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm7990-201ENSMUST00000212126 593 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 AC124420.1-201ENSMUST00000219779 791 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm6049-201ENSMUST00000222369 458 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 AV026068-231ENSMUST00000225862 482 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 AC154738.7-201ENSMUST00000228606 579 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Clec2j-201ENSMUST00000032517 515 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm45838-201ENSMUST00000207355 2447 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm37221-201ENSMUST00000194472 3007 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 AC164092.3-201ENSMUST00000216970 1323 ntBASIC4.89□□□□□ -1.63
Nkx3-1P97436 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Nkx3-1P97436 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm6134-201ENSMUST00000117265 171 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm9429-201ENSMUST00000117804 868 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm14512-201ENSMUST00000117924 230 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm11826-201ENSMUST00000118781 438 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm15840-201ENSMUST00000122099 943 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm13738-201ENSMUST00000122437 469 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm4845-201ENSMUST00000179202 562 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm29592-201ENSMUST00000189434 370 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm18036-201ENSMUST00000195256 272 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm45082-201ENSMUST00000206082 601 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 AC107757.1-201ENSMUST00000226780 357 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms