Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tpm1P58771 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tpm1P58771 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tpm1P58771 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Tpm1P58771 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Tpm1P58771 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Tpm1P58771 Gm31258-201ENSMUST00000194532 3297 ntBASIC6.07□□□□□ -1.44
Tpm1P58771 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Tpm1P58771 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tpm1P58771 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm11826-201ENSMUST00000118781 438 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm15741-201ENSMUST00000119401 754 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm7079-201ENSMUST00000119726 171 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm14472-201ENSMUST00000119815 282 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm6446-201ENSMUST00000120604 818 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm8722-201ENSMUST00000121466 769 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm6264-201ENSMUST00000160802 624 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm21542-201ENSMUST00000182307 993 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm43946-201ENSMUST00000204058 886 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC6.06□□□□□ -1.44
Tpm1P58771 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.06□□□□□ -1.44
Tpm1P58771 Gm45185-201ENSMUST00000207556 404 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.06□□□□□ -1.44
Tpm1P58771 Gm7802-201ENSMUST00000216464 262 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.06□□□□□ -1.44
Tpm1P58771 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.06□□□□□ -1.44
Tpm1P58771 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.06□□□□□ -1.44
Tpm1P58771 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Tpm1P58771 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tpm1P58771 Mir7b-201ENSMUST00000083557 111 ntBASIC6.06□□□□□ -1.44
Tpm1P58771 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tpm1P58771 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Tpm1P58771 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Tpm1P58771 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC6.06□□□□□ -1.44
Tpm1P58771 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Tpm1P58771 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tpm1P58771 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tpm1P58771 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tpm1P58771 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Tpm1P58771 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Tpm1P58771 Gm3931-201ENSMUST00000119038 455 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Gm15022-201ENSMUST00000122074 746 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Tpm1P58771 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Gm18953-201ENSMUST00000175694 300 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.05□□□□□ -1.44
Tpm1P58771 Gm42464-202ENSMUST00000198111 774 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Gm43629-201ENSMUST00000201782 704 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Tpm1P58771 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Tpm1P58771 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tpm1P58771 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.05□□□□□ -1.44
Tpm1P58771 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Tpm1P58771 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Tpm1P58771 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.04□□□□□ -1.44
Tpm1P58771 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tpm1P58771 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.04□□□□□ -1.44
Tpm1P58771 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC6.04□□□□□ -1.44
Tpm1P58771 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Tpm1P58771 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tpm1P58771 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.04□□□□□ -1.44
Tpm1P58771 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Tpm1P58771 Zscan4a-201ENSMUST00000210573 2279 ntBASIC6.04□□□□□ -1.44
Tpm1P58771 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tpm1P58771 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Tpm1P58771 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Tpm1P58771 Gm12641-201ENSMUST00000117874 985 ntBASIC6.04□□□□□ -1.44
Tpm1P58771 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.04□□□□□ -1.44
Tpm1P58771 Gm15034-201ENSMUST00000120043 349 ntBASIC6.04□□□□□ -1.44
Tpm1P58771 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms