Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox3P53784 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.44□□□□□ -1.54
Sox3P53784 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sox3P53784 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.43□□□□□ -1.54
Sox3P53784 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Gm22488-201ENSMUST00000116811 127 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm13077-201ENSMUST00000121941 484 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.43□□□□□ -1.54
Sox3P53784 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.43□□□□□ -1.54
Sox3P53784 Mir1963-201ENSMUST00000158594 59 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.43□□□□□ -1.54
Sox3P53784 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Sox3P53784 Gm24081-201ENSMUST00000175177 125 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm21399-201ENSMUST00000180210 597 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.43□□□□□ -1.54
Sox3P53784 Gm28429-201ENSMUST00000188521 363 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm44463-201ENSMUST00000198895 137 ntBASIC5.43□□□□□ -1.54
Sox3P53784 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Sox3P53784 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Sox3P53784 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.43□□□□□ -1.54
Sox3P53784 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Sox3P53784 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Sox3P53784 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.43□□□□□ -1.54
Sox3P53784 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.43□□□□□ -1.54
Sox3P53784 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm14388-201ENSMUST00000118119 477 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm13531-201ENSMUST00000121893 543 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox3P53784 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm25271-201ENSMUST00000157273 290 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm22311-201ENSMUST00000158006 110 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm24940-201ENSMUST00000158326 108 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm24363-201ENSMUST00000158440 311 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm18343-201ENSMUST00000172802 604 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Mir6343-201ENSMUST00000183584 84 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm8367-201ENSMUST00000186145 887 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm29111-201ENSMUST00000188823 696 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox3P53784 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm28584-201ENSMUST00000191489 696 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm17934-201ENSMUST00000192818 422 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm38138-201ENSMUST00000193274 696 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm37991-201ENSMUST00000194297 696 ntBASIC5.42□□□□□ -1.54
Sox3P53784 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.42□□□□□ -1.54
Sox3P53784 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.42□□□□□ -1.54
Sox3P53784 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Sox3P53784 Gm43222-201ENSMUST00000199013 603 ntBASIC5.42□□□□□ -1.54
Sox3P53784 Gm42663-201ENSMUST00000199883 351 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms