Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.66□□□□□ -1.34
Traf1P39428 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Gm37769-201ENSMUST00000193753 2369 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Traf1P39428 Gm14998-201ENSMUST00000120502 495 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm13593-201ENSMUST00000121329 692 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm26086-201ENSMUST00000157902 263 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm25489-201ENSMUST00000158727 141 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Mir6971-201ENSMUST00000183497 63 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.66□□□□□ -1.34
Traf1P39428 Gm37024-201ENSMUST00000192224 868 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.66□□□□□ -1.34
Traf1P39428 Gm43516-201ENSMUST00000196891 322 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm18702-201ENSMUST00000196923 588 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm31306-201ENSMUST00000197517 508 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm19060-201ENSMUST00000201959 421 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm42646-201ENSMUST00000202233 914 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm18689-201ENSMUST00000203969 902 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Traf1P39428 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.66□□□□□ -1.34
Traf1P39428 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.66□□□□□ -1.34
Traf1P39428 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.66□□□□□ -1.34
Traf1P39428 Gm36501-201ENSMUST00000221857 745 ntBASIC6.66□□□□□ -1.34
Traf1P39428 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Traf1P39428 Desi2-202ENSMUST00000069568 1193 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.66□□□□□ -1.34
Traf1P39428 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Traf1P39428 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
Traf1P39428 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.66□□□□□ -1.34
Traf1P39428 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.66□□□□□ -1.34
Traf1P39428 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Traf1P39428 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Traf1P39428 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Traf1P39428 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Traf1P39428 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Traf1P39428 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Traf1P39428 Gm11908-201ENSMUST00000117755 347 ntBASIC6.65□□□□□ -1.34
Traf1P39428 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.65□□□□□ -1.34
Traf1P39428 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Gm23250-201ENSMUST00000157444 267 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Gm24103-201ENSMUST00000174930 77 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.65□□□□□ -1.34
Traf1P39428 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.65□□□□□ -1.34
Traf1P39428 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.65□□□□□ -1.34
Traf1P39428 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Traf1P39428 Gm5735-201ENSMUST00000207053 167 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Gm45628-201ENSMUST00000210849 274 ntBASIC6.65□□□□□ -1.34
Traf1P39428 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.65□□□□□ -1.34
Traf1P39428 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Traf1P39428 Gm24919-201ENSMUST00000083020 106 ntBASIC6.65□□□□□ -1.34
Traf1P39428 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.65□□□□□ -1.34
Traf1P39428 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.65□□□□□ -1.35
Traf1P39428 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Traf1P39428 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Traf1P39428 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Traf1P39428 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Traf1P39428 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Traf1P39428 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.64□□□□□ -1.35
Traf1P39428 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Traf1P39428 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm11481-201ENSMUST00000120069 255 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm12731-201ENSMUST00000120932 268 ntBASIC6.64□□□□□ -1.35
Traf1P39428 Gm15840-201ENSMUST00000122099 943 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms