Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm29503-201ENSMUST00000191044 930 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm6680-201ENSMUST00000192789 950 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm37770-201ENSMUST00000192855 772 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Gm43744-201ENSMUST00000196387 688 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm8209-201ENSMUST00000206386 553 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm19137-201ENSMUST00000213790 1164 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Usp4P35123 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Usp4P35123 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm25005-201ENSMUST00000083812 156 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Usp4P35123 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Usp4P35123 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.5□□□□□ -1.37
Usp4P35123 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.5□□□□□ -1.37
Usp4P35123 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Usp4P35123 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
Usp4P35123 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp4P35123 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp4P35123 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.49□□□□□ -1.37
Usp4P35123 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.49□□□□□ -1.37
Usp4P35123 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC6.49□□□□□ -1.37
Usp4P35123 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.49□□□□□ -1.37
Usp4P35123 Gm25117-201ENSMUST00000157194 144 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm26037-201ENSMUST00000158150 311 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC6.49□□□□□ -1.37
Usp4P35123 Gm22392-201ENSMUST00000177971 107 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm17824-201ENSMUST00000197690 805 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm43762-201ENSMUST00000201521 295 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm5339-201ENSMUST00000210551 1102 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm45628-201ENSMUST00000210849 274 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp4P35123 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.49□□□□□ -1.37
Usp4P35123 AC109214.2-201ENSMUST00000220089 358 ntBASIC6.49□□□□□ -1.37
Usp4P35123 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.49□□□□□ -1.37
Usp4P35123 AL671874.1-201ENSMUST00000223746 1123 ntBASIC6.49□□□□□ -1.37
Usp4P35123 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Gm22043-201ENSMUST00000082993 158 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
Usp4P35123 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Usp4P35123 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.49□□□□□ -1.37
Usp4P35123 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.49□□□□□ -1.37
Usp4P35123 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.49□□□□□ -1.37
Usp4P35123 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp4P35123 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Usp4P35123 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Usp4P35123 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Usp4P35123 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp4P35123 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp4P35123 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp4P35123 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Usp4P35123 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp4P35123 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp4P35123 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp4P35123 Gm24272-201ENSMUST00000102329 98 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp4P35123 Gm24888-201ENSMUST00000104387 130 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Gm25564-201ENSMUST00000104604 132 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Gm9836-201ENSMUST00000117132 216 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Gm11462-201ENSMUST00000117749 562 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Gm11393-201ENSMUST00000118019 288 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Gm13772-201ENSMUST00000118431 317 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Gm12889-201ENSMUST00000118684 241 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Gm14018-201ENSMUST00000119042 455 ntBASIC6.48□□□□□ -1.37
Usp4P35123 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
Usp4P35123 Gm4914-201ENSMUST00000119757 459 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms