Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm20519-201ENSMUST00000173684 359 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm22355-201ENSMUST00000175531 96 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm22569-201ENSMUST00000175545 124 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Mir6926-201ENSMUST00000184562 68 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm21654-201ENSMUST00000188086 691 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm38185-201ENSMUST00000193195 694 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC6.3□□□□□ -1.4
Col2a1P28481 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.3□□□□□ -1.4
Col2a1P28481 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.3□□□□□ -1.4
Col2a1P28481 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Col2a1P28481 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Col2a1P28481 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm12734-201ENSMUST00000120228 948 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.29□□□□□ -1.4
Col2a1P28481 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm11507-201ENSMUST00000156462 412 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm19189-201ENSMUST00000221689 754 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 CT030182.2-201ENSMUST00000223569 620 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm24706-201ENSMUST00000082806 137 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm38189-201ENSMUST00000194495 1457 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col2a1P28481 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Gm37101-201ENSMUST00000191656 3660 ntBASIC6.29□□□□□ -1.4
Col2a1P28481 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col2a1P28481 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col2a1P28481 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col2a1P28481 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.28□□□□□ -1.4
Col2a1P28481 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Col2a1P28481 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm24350-201ENSMUST00000104163 133 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm13738-201ENSMUST00000122437 469 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm10319-202ENSMUST00000159439 846 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm17981-201ENSMUST00000191109 739 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm37882-201ENSMUST00000195254 196 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Gm45032-201ENSMUST00000205375 520 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.28□□□□□ -1.4
Col2a1P28481 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Col2a1P28481 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.28□□□□□ -1.4
Col2a1P28481 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm11679-201ENSMUST00000121830 779 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col2a1P28481 Gm26312-201ENSMUST00000157769 165 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Gm20545-201ENSMUST00000174739 210 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Gm21909-201ENSMUST00000178260 439 ntBASIC6.28□□□□□ -1.4
Col2a1P28481 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col2a1P28481 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms